Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 MKK1YOR231W 1527 nt4.67□□□□□ -1.66
VPS55P47111 COX20YDR231C 618 nt4.67□□□□□ -1.66
VPS55P47111 YLR126CYLR126C 756 nt4.67□□□□□ -1.66
VPS55P47111 YML012C-AYML012C-A 378 nt4.67□□□□□ -1.66
VPS55P47111 YNL017CYNL017C 339 nt4.67□□□□□ -1.66
VPS55P47111 IFA38YBR159W 1044 nt4.67□□□□□ -1.66
VPS55P47111 ACC1YNR016C 6702 nt4.67□□□□□ -1.66
VPS55P47111 PET112YBL080C 1626 nt4.67□□□□□ -1.66
VPS55P47111 FET4YMR319C 1659 nt4.67□□□□□ -1.66
VPS55P47111 PRS2YER099C 957 nt4.66□□□□□ -1.66
VPS55P47111 GLN1YPR035W 1113 nt4.66□□□□□ -1.66
VPS55P47111 VPS70YJR126C 2436 nt4.66□□□□□ -1.66
VPS55P47111 TEP1YNL128W 1305 nt4.66□□□□□ -1.66
VPS55P47111 GPA2YER020W 1350 nt4.65□□□□□ -1.66
VPS55P47111 HIS7YBR248C 1659 nt4.65□□□□□ -1.66
VPS55P47111 UGX2YDL169C 672 nt4.65□□□□□ -1.67
VPS55P47111 DFM1YDR411C 1026 nt4.65□□□□□ -1.67
VPS55P47111 ASK1YKL052C 879 nt4.65□□□□□ -1.67
VPS55P47111 RPN7YPR108W 1290 nt4.65□□□□□ -1.67
VPS55P47111 YBR124WYBR124W 360 nt4.65□□□□□ -1.67
VPS55P47111 FRS2YFL022C 1512 nt4.65□□□□□ -1.67
VPS55P47111 ALD6YPL061W 1503 nt4.64□□□□□ -1.67
VPS55P47111 PGK1YCR012W 1251 nt4.64□□□□□ -1.67
VPS55P47111 RHO4YKR055W 876 nt4.64□□□□□ -1.67
VPS55P47111 YOL163WYOL163W 510 nt4.64□□□□□ -1.67
VPS55P47111 MCM6YGL201C 3054 nt4.64□□□□□ -1.67
VPS55P47111 ISN1YOR155C 1353 nt4.64□□□□□ -1.67
VPS55P47111 SUP19tS(UGA)E 82 nt4.63□□□□□ -1.67
VPS55P47111 SUP17tS(UGA)I 82 nt4.63□□□□□ -1.67
VPS55P47111 SUP16tS(UGA)P 82 nt4.63□□□□□ -1.67
VPS55P47111 SHP1YBL058W 1272 nt4.63□□□□□ -1.67
VPS55P47111 SNN1YNL086W 309 nt4.63□□□□□ -1.67
VPS55P47111 YNR040WYNR040W 771 nt4.63□□□□□ -1.67
VPS55P47111 YOR200WYOR200W 399 nt4.63□□□□□ -1.67
VPS55P47111 UBC11YOR339C 471 nt4.63□□□□□ -1.67
VPS55P47111 YOL036WYOL036W 2286 nt4.63□□□□□ -1.67
VPS55P47111 PRP24YMR268C 1335 nt4.63□□□□□ -1.67
VPS55P47111 COR1YBL045C 1374 nt4.63□□□□□ -1.67
VPS55P47111 MKK2YPL140C 1521 nt4.62□□□□□ -1.67
VPS55P47111 CRZ1YNL027W 2037 nt4.62□□□□□ -1.67
VPS55P47111 PHB1YGR132C 864 nt4.62□□□□□ -1.67
VPS55P47111 SUP2tY(GUA)D 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP11tY(GUA)F1 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP6tY(GUA)F2 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP7tY(GUA)J1 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP4tY(GUA)J2 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP5tY(GUA)M1 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP8tY(GUA)M2 75 nt4.62□□□□□ -1.67
VPS55P47111 SUP3tY(GUA)O 75 nt4.62□□□□□ -1.67
VPS55P47111 MRS1YIR021W 1092 nt4.62□□□□□ -1.67
VPS55P47111 ARA2YMR041C 1008 nt4.62□□□□□ -1.67
VPS55P47111 AAD15YOL165C 432 nt4.62□□□□□ -1.67
VPS55P47111 MRP51YPL118W 1035 nt4.62□□□□□ -1.67
VPS55P47111 YPR123CYPR123C 435 nt4.62□□□□□ -1.67
VPS55P47111 ATG12YBR217W 561 nt4.62□□□□□ -1.67
VPS55P47111 MNN5YJL186W 1761 nt4.62□□□□□ -1.67
VPS55P47111 YDL022C-AYDL022C-A 249 nt4.61□□□□□ -1.67
VPS55P47111 EGD2YHR193C 525 nt4.61□□□□□ -1.67
VPS55P47111 SPO7YAL009W 780 nt4.61□□□□□ -1.67
VPS55P47111 MRK1YDL079C 1506 nt4.61□□□□□ -1.67
VPS55P47111 SFB3YHR098C 2790 nt4.6□□□□□ -1.67
VPS55P47111 YBR056C-BYBR056C-B 159 nt4.6□□□□□ -1.67
VPS55P47111 YBR144CYBR144C 315 nt4.6□□□□□ -1.67
VPS55P47111 MCM3YEL032W 2916 nt4.6□□□□□ -1.67
VPS55P47111 TEL2YGR099W 2067 nt4.6□□□□□ -1.67
VPS55P47111 YIR007WYIR007W 2295 nt4.6□□□□□ -1.67
VPS55P47111 RPN11YFR004W 921 nt4.59□□□□□ -1.67
VPS55P47111 HGH1YGR187C 1185 nt4.59□□□□□ -1.67
VPS55P47111 YHL017WYHL017W 1599 nt4.59□□□□□ -1.67
VPS55P47111 KEX2YNL238W 2445 nt4.59□□□□□ -1.67
VPS55P47111 YPL102CYPL102C 303 nt4.59□□□□□ -1.67
VPS55P47111 RNR3YIL066C 2610 nt4.58□□□□□ -1.68
VPS55P47111 PUF3YLL013C 2640 nt4.58□□□□□ -1.68
VPS55P47111 IRC7YFR055W 1023 nt4.58□□□□□ -1.68
VPS55P47111 HAP2YGL237C 798 nt4.58□□□□□ -1.68
VPS55P47111 YML083CYML083C 1257 nt4.58□□□□□ -1.68
VPS55P47111 GEX1YCL073C 1848 nt4.58□□□□□ -1.68
VPS55P47111 GEX2YKR106W 1848 nt4.58□□□□□ -1.68
VPS55P47111 DBP9YLR276C 1785 nt4.58□□□□□ -1.68
VPS55P47111 TNA1YGR260W 1605 nt4.57□□□□□ -1.68
VPS55P47111 SUB2YDL084W 1341 nt4.57□□□□□ -1.68
VPS55P47111 RPL7AYGL076C 735 nt4.57□□□□□ -1.68
VPS55P47111 ERP5YHR110W 639 nt4.57□□□□□ -1.68
VPS55P47111 EFM3YJR129C 1020 nt4.57□□□□□ -1.68
VPS55P47111 SNO4YMR322C 714 nt4.57□□□□□ -1.68
VPS55P47111 YBL070CYBL070C 321 nt4.57□□□□□ -1.68
VPS55P47111 HSP33YOR391C 714 nt4.57□□□□□ -1.68
VPS55P47111 RPL7BYPL198W 735 nt4.57□□□□□ -1.68
VPS55P47111 HSP32YPL280W 714 nt4.57□□□□□ -1.68
VPS55P47111 GIT1YCR098C 1557 nt4.57□□□□□ -1.68
VPS55P47111 CNE1YAL058W 1509 nt4.56□□□□□ -1.68
VPS55P47111 YDL172CYDL172C 480 nt4.56□□□□□ -1.68
VPS55P47111 DJP1YIR004W 1299 nt4.56□□□□□ -1.68
VPS55P47111 YJU3YKL094W 942 nt4.56□□□□□ -1.68
VPS55P47111 GEP5YLR091W 882 nt4.56□□□□□ -1.68
VPS55P47111 RPS9AYPL081W 594 nt4.56□□□□□ -1.68
VPS55P47111 VRP1YLR337C 2454 nt4.56□□□□□ -1.68
VPS55P47111 APE3YBR286W 1614 nt4.56□□□□□ -1.68
VPS55P47111 RAD3YER171W 2337 nt4.56□□□□□ -1.68
VPS55P47111 MTF2YDL044C 1323 nt4.55□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 112.8 ms