Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 AC107918.4-202ENST00000641623 219 ntBASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DDX49Q9Y6V7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX49Q9Y6V7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX49Q9Y6V7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DDX49Q9Y6V7 AC103702.1-201ENST00000548801 2630 ntBASIC20.14■□□□□ 0.82
DDX49Q9Y6V7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
DDX49Q9Y6V7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.14■□□□□ 0.82
DDX49Q9Y6V7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 AC079776.2-201ENST00000641154 1609 ntBASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 AC097374.2-201ENST00000618617 1306 ntBASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 AC007967.2-201ENST00000432613 625 ntBASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 UNC93B6-202ENST00000528242 690 ntBASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
DDX49Q9Y6V7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 AC148477.5-201ENST00000625164 1645 ntBASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 AD001527.2-201ENST00000622994 785 ntBASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 AC022188.1-201ENST00000620960 1664 ntBASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DDX49Q9Y6V7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 RPS2P28-201ENST00000314255 741 ntBASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 BX842568.4-201ENST00000421222 227 ntBASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.12■□□□□ 0.81
DDX49Q9Y6V7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms