Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AC006486.2-201ENST00000624246 2199 ntBASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ALOX12P2-203ENST00000570921 1945 ntBASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AP002490.2-201ENST00000524791 560 ntBASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AC010240.3-201ENST00000607688 395 ntBASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 AC026748.1-201ENST00000624349 3251 ntBASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CHTOPQ9Y3Y2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AC096733.2-201ENST00000609937 1394 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AC138969.2-201ENST00000532739 9932 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AL353807.1-201ENST00000427475 662 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 CROCCP5-201ENST00000436658 830 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 MFAP1P1-201ENST00000442257 1255 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AC006970.2-201ENST00000450065 779 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 FSCN1P1-201ENST00000568912 1481 ntBASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CHTOPQ9Y3Y2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CHTOPQ9Y3Y2 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms