Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.87■□□□□ 0.13
LHX6Q9UPM6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AC011270.2-201ENST00000624293 2550 ntBASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AC100803.2-201ENST00000562459 1963 ntBASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ACTBP11-201ENST00000436287 1126 ntBASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 AL645728.2-201ENST00000641974 660 ntBASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LHX6Q9UPM6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 BX276092.7-203ENST00000637198 1536 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AC009336.1-201ENST00000608941 1553 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AL390039.1-201ENST00000399148 611 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 IGHV3-52-201ENST00000519770 353 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 CLIC4P2-201ENST00000601934 717 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 MIR6727-201ENST00000620702 65 ntBASIC15.85■□□□□ 0.13
LHX6Q9UPM6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LHX6Q9UPM6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms