Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HMG20BQ9P0W2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 RFPL4AP1-201ENST00000530883 850 ntBASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 FLJ38576-201ENST00000623820 2459 ntBASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HMG20BQ9P0W2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 AL391256.1-201ENST00000443260 1855 ntBASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 AC021097.1-201ENST00000607902 574 ntBASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.27■□□□□ 0.84
HMG20BQ9P0W2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HMG20BQ9P0W2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 GPS2P2-201ENST00000430745 888 ntBASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AL138918.1-201ENST00000568306 659 ntBASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HMG20BQ9P0W2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms