Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AC211486.1-202ENST00000416371 468 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AC211476.1-201ENST00000503899 468 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 CYP2A7P1-201ENST00000595391 815 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AC092364.2-202ENST00000597012 1073 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AC013467.2-201ENST00000605472 835 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 BCAR1-209ENST00000546196 1340 ntBASIC16.19■□□□□ 0.18
CUEDC1Q9NWM3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC046158.3-201ENST00000624947 2558 ntBASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 CYMP-203ENST00000474680 1263 ntBASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC004877.2-201ENST00000623941 599 ntBASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 SNX33P1-201ENST00000592116 1762 ntBASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CUEDC1Q9NWM3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC087641.1-201ENST00000557561 1021 ntBASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 MIR4515-201ENST00000584082 81 ntBASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 AL513190.1-201ENST00000621254 727 ntBASIC16.17■□□□□ 0.18
CUEDC1Q9NWM3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms