Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AP002383.4-201ENST00000442518 975 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 PRYP5-201ENST00000451909 266 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC074051.2-201ENST00000565115 352 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC092329.2-201ENST00000598402 547 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AL353135.1-201ENST00000606729 504 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC116407.4-201ENST00000623319 1061 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 AC024909.3-201ENST00000611513 2257 ntBASIC11.55□□□□□ -0.56
CDC42SE2Q9NRR3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AC104819.1-201ENST00000504587 486 ntBASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AL590326.2-201ENST00000625139 305 ntBASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 AL671710.1-201ENST00000610245 2349 ntBASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
CDC42SE2Q9NRR3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms