Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AC090340.1-201ENST00000620778 4980 ntBASIC18.55■□□□□ 0.56
VTA1Q9NP79 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AL080243.2-201ENST00000418783 582 ntBASIC18.55■□□□□ 0.56
VTA1Q9NP79 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AC093724.1-201ENST00000448659 1027 ntBASIC18.55■□□□□ 0.56
VTA1Q9NP79 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.55■□□□□ 0.56
VTA1Q9NP79 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AL079307.3-201ENST00000556114 283 ntBASIC18.55■□□□□ 0.56
VTA1Q9NP79 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 AC008738.7-201ENST00000609744 511 ntBASIC18.55■□□□□ 0.56
VTA1Q9NP79 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VTA1Q9NP79 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
VTA1Q9NP79 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 CR383656.12-201ENST00000549567 513 ntBASIC18.54■□□□□ 0.56
VTA1Q9NP79 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 PP12613-201ENST00000424958 2230 ntBASIC18.54■□□□□ 0.56
VTA1Q9NP79 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.54■□□□□ 0.56
VTA1Q9NP79 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VTA1Q9NP79 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VTA1Q9NP79 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.53■□□□□ 0.56
VTA1Q9NP79 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms