Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 PMPCAP1-201ENST00000508114 1576 ntBASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
FOXRED1Q96CU9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 TP73-AS1-210ENST00000637775 1455 ntBASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 AP002383.4-201ENST00000442518 975 ntBASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 LINC00265-3P-201ENST00000447588 903 ntBASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 AC002310.6-201ENST00000624451 1377 ntBASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
FOXRED1Q96CU9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
FOXRED1Q96CU9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms