Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP6NLQ92738 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.79■□□□□ 0.6
USP6NLQ92738 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.79■□□□□ 0.6
USP6NLQ92738 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.79■□□□□ 0.6
USP6NLQ92738 CHCHD2P3-201ENST00000603038 451 ntBASIC18.79■□□□□ 0.6
USP6NLQ92738 AL162274.1-201ENST00000617191 1098 ntBASIC18.79■□□□□ 0.6
USP6NLQ92738 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.79■□□□□ 0.6
USP6NLQ92738 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.79■□□□□ 0.6
USP6NLQ92738 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.79■□□□□ 0.6
USP6NLQ92738 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP6NLQ92738 AC090340.1-201ENST00000620778 4980 ntBASIC18.79■□□□□ 0.6
USP6NLQ92738 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP6NLQ92738 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
USP6NLQ92738 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6NLQ92738 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.78■□□□□ 0.6
USP6NLQ92738 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.78■□□□□ 0.6
USP6NLQ92738 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6NLQ92738 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.78■□□□□ 0.6
USP6NLQ92738 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
USP6NLQ92738 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.78■□□□□ 0.6
USP6NLQ92738 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
USP6NLQ92738 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
USP6NLQ92738 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.77■□□□□ 0.6
USP6NLQ92738 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.77■□□□□ 0.6
USP6NLQ92738 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 AL512361.1-201ENST00000554200 418 ntBASIC18.77■□□□□ 0.6
USP6NLQ92738 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.77■□□□□ 0.6
USP6NLQ92738 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 AC132938.2-201ENST00000579188 680 ntBASIC18.77■□□□□ 0.6
USP6NLQ92738 AL591163.1-201ENST00000641757 987 ntBASIC18.77■□□□□ 0.6
USP6NLQ92738 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.77■□□□□ 0.6
USP6NLQ92738 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.77■□□□□ 0.6
USP6NLQ92738 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
USP6NLQ92738 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.77■□□□□ 0.59
USP6NLQ92738 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP6NLQ92738 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP6NLQ92738 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
USP6NLQ92738 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.76■□□□□ 0.59
USP6NLQ92738 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.76■□□□□ 0.59
USP6NLQ92738 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
USP6NLQ92738 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
USP6NLQ92738 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
USP6NLQ92738 AL512384.1-201ENST00000406683 331 ntBASIC18.76■□□□□ 0.59
USP6NLQ92738 AC087499.6-201ENST00000411576 835 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms