Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHROOM3Q8TF72 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 BCAR1-209ENST00000546196 1340 ntBASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 WASH6P-202ENST00000359512 1437 ntBASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHROOM3Q8TF72 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AL645728.2-201ENST00000641974 660 ntBASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AC025580.3-201ENST00000617932 1424 ntBASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 AL096865.1-201ENST00000606796 927 ntBASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.97■□□□□ 0.31
SHROOM3Q8TF72 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHROOM3Q8TF72 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms