Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 HIST2H2BC-201ENST00000498492 580 ntBASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AP001258.2-201ENST00000529891 490 ntBASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 FAM21FP-201ENST00000426241 1131 ntBASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC11.04□□□□□ -0.64
ALMS1Q8TCU4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC007551.1-201ENST00000457394 519 ntBASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 MIR4722-201ENST00000578292 60 ntBASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC093525.9-201ENST00000624961 1746 ntBASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC138028.4-201ENST00000564984 1845 ntBASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC079328.1-201ENST00000560358 952 ntBASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 AL589702.1-201ENST00000641229 1509 ntBASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC11.03□□□□□ -0.64
ALMS1Q8TCU4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 AL008638.5-201ENST00000623814 1298 ntBASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 GGT4P-201ENST00000623672 1708 ntBASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
ALMS1Q8TCU4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.02□□□□□ -0.65
ALMS1Q8TCU4 AL442647.2-201ENST00000429864 857 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms