Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 SPTLC1P1-201ENST00000447199 261 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 RN7SL692P-201ENST00000464677 288 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 AL138828.2-201ENST00000615812 383 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 AL355312.1-201ENST00000407115 2176 ntBASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SYNPOQ8N3V7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 AC080080.1-201ENST00000625121 2420 ntBASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 CU639417.3-201ENST00000624240 1404 ntBASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 HLA-H-201ENST00000383620 1096 ntBASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 COX5BP8-201ENST00000416911 349 ntBASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 SPDYE12P-201ENST00000618416 771 ntBASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 AC009053.2-201ENST00000563701 2365 ntBASIC16.91■□□□□ 0.3
SYNPOQ8N3V7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SYNPOQ8N3V7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms