Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 MIR940-201ENST00000401276 94 ntBASIC16.66■□□□□ 0.26
APLFQ8IW19 AC060834.1-201ENST00000443027 2032 ntBASIC16.66■□□□□ 0.26
APLFQ8IW19 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.66■□□□□ 0.26
APLFQ8IW19 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.66■□□□□ 0.26
APLFQ8IW19 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.66■□□□□ 0.26
APLFQ8IW19 AC027601.4-201ENST00000611259 610 ntBASIC16.66■□□□□ 0.26
APLFQ8IW19 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.66■□□□□ 0.26
APLFQ8IW19 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
APLFQ8IW19 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 FAM197Y3-203ENST00000618346 717 ntBASIC16.66■□□□□ 0.26
APLFQ8IW19 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.66■□□□□ 0.26
APLFQ8IW19 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.66■□□□□ 0.26
APLFQ8IW19 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
APLFQ8IW19 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
APLFQ8IW19 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
APLFQ8IW19 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
APLFQ8IW19 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 AL591424.1-201ENST00000442569 1213 ntBASIC16.65■□□□□ 0.26
APLFQ8IW19 AC092183.1-201ENST00000469884 875 ntBASIC16.65■□□□□ 0.26
APLFQ8IW19 PGAM5P1-201ENST00000518923 814 ntBASIC16.65■□□□□ 0.26
APLFQ8IW19 SART3-203ENST00000546611 1184 ntBASIC16.65■□□□□ 0.26
APLFQ8IW19 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.65■□□□□ 0.26
APLFQ8IW19 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
APLFQ8IW19 AL139288.1-201ENST00000623748 933 ntBASIC16.65■□□□□ 0.26
APLFQ8IW19 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APLFQ8IW19 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.65■□□□□ 0.26
APLFQ8IW19 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
APLFQ8IW19 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
APLFQ8IW19 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.64■□□□□ 0.26
APLFQ8IW19 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.64■□□□□ 0.25
APLFQ8IW19 AC063926.3-201ENST00000624734 5658 ntBASIC16.64■□□□□ 0.25
APLFQ8IW19 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APLFQ8IW19 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
APLFQ8IW19 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.64■□□□□ 0.25
APLFQ8IW19 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APLFQ8IW19 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.64■□□□□ 0.25
APLFQ8IW19 OR7E14P-202ENST00000530490 1290 ntBASIC16.64■□□□□ 0.25
APLFQ8IW19 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.64■□□□□ 0.25
APLFQ8IW19 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.64■□□□□ 0.25
APLFQ8IW19 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APLFQ8IW19 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms