Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LYSMD2Q8IV50 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 AC012618.2-201ENST00000428058 849 ntBASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 AC112698.1-201ENST00000510299 916 ntBASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 LINC01101-201ENST00000622953 1884 ntBASIC14.71□□□□□ -0.05
LYSMD2Q8IV50 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 AC016027.1-202ENST00000607927 1699 ntBASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LYSMD2Q8IV50 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 AL391807.1-203ENST00000604392 2365 ntBASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 KRT89P-201ENST00000620027 1478 ntBASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 CICP23-201ENST00000605013 2741 ntBASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 FITM1-202ENST00000559294 800 ntBASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 AC005840.4-201ENST00000541242 2494 ntBASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 AC002310.6-201ENST00000624451 1377 ntBASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LYSMD2Q8IV50 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms