Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 BOLA2P3-201ENST00000404566 256 ntBASIC13.86□□□□□ -0.19
CSMD2Q7Z408 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 AC091167.2-201ENST00000579581 588 ntBASIC13.86□□□□□ -0.19
CSMD2Q7Z408 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSMD2Q7Z408 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 KRT43P-201ENST00000434019 910 ntBASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 MEP1AP4-201ENST00000423244 1087 ntBASIC13.85□□□□□ -0.19
CSMD2Q7Z408 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AL022328.1-201ENST00000610050 478 ntBASIC13.85□□□□□ -0.19
CSMD2Q7Z408 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 LDHBP1-201ENST00000455730 1119 ntBASIC13.85□□□□□ -0.19
CSMD2Q7Z408 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 HNRNPUP1-201ENST00000554987 333 ntBASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AC079328.1-201ENST00000560358 952 ntBASIC13.85□□□□□ -0.19
CSMD2Q7Z408 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CSMD2Q7Z408 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 RN7SL560P-201ENST00000577943 264 ntBASIC13.84□□□□□ -0.19
CSMD2Q7Z408 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 AC091271.1-201ENST00000611877 1162 ntBASIC13.84□□□□□ -0.19
CSMD2Q7Z408 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CSMD2Q7Z408 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms