Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 AC074044.1-201ENST00000609673 707 ntBASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC141Q6ZP82 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 AC098850.1-201ENST00000419919 790 ntBASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 GLI4-203ENST00000517468 963 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC141Q6ZP82 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 AL139010.1-201ENST00000454878 894 ntBASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 AC017083.2-201ENST00000608069 979 ntBASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC141Q6ZP82 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 MXI1-205ENST00000393134 889 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 HIST3H2BA-201ENST00000436555 524 ntBASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 TTTY23B-201ENST00000442790 549 ntBASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 PTK7-212ENST00000476760 902 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC141Q6ZP82 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 AC112492.5-201ENST00000421897 457 ntBASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 RRP7BP-205ENST00000566851 833 ntBASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 CTBP2P3-201ENST00000585629 1255 ntBASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 AC093726.1-201ENST00000608064 963 ntBASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 AL391069.4-201ENST00000609583 481 ntBASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC141Q6ZP82 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms