Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP11P51784 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.84■□□□□ 0.61
USP11P51784 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 AC254562.1-201ENST00000417586 456 ntBASIC18.84■□□□□ 0.61
USP11P51784 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 AC004967.1-201ENST00000453589 447 ntBASIC18.84■□□□□ 0.61
USP11P51784 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.84■□□□□ 0.61
USP11P51784 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.84■□□□□ 0.61
USP11P51784 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.84■□□□□ 0.61
USP11P51784 AL513210.1-201ENST00000629608 234 ntBASIC18.84■□□□□ 0.61
USP11P51784 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP11P51784 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USP11P51784 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.84■□□□□ 0.61
USP11P51784 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.84■□□□□ 0.61
USP11P51784 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.83■□□□□ 0.61
USP11P51784 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
USP11P51784 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.83■□□□□ 0.61
USP11P51784 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
USP11P51784 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.83■□□□□ 0.61
USP11P51784 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USP11P51784 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.83■□□□□ 0.6
USP11P51784 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.83■□□□□ 0.6
USP11P51784 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.83■□□□□ 0.6
USP11P51784 SPDYE11-202ENST00000450699 704 ntBASIC18.83■□□□□ 0.6
USP11P51784 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.83■□□□□ 0.6
USP11P51784 KRT8P48-201ENST00000515599 1220 ntBASIC18.83■□□□□ 0.6
USP11P51784 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 SPDYE9P-201ENST00000570642 692 ntBASIC18.83■□□□□ 0.6
USP11P51784 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.83■□□□□ 0.6
USP11P51784 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.83■□□□□ 0.6
USP11P51784 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.83■□□□□ 0.6
USP11P51784 SPDYE10P-202ENST00000612005 668 ntBASIC18.83■□□□□ 0.6
USP11P51784 SPDYE8P-202ENST00000612377 668 ntBASIC18.83■□□□□ 0.6
USP11P51784 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
USP11P51784 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
USP11P51784 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP11P51784 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 GGT3P-204ENST00000453783 1664 ntBASIC18.82■□□□□ 0.6
USP11P51784 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.82■□□□□ 0.6
USP11P51784 AP000344.2-201ENST00000512987 629 ntBASIC18.82■□□□□ 0.6
USP11P51784 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
USP11P51784 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.82■□□□□ 0.6
USP11P51784 GPALPP1-207ENST00000611650 899 ntBASIC18.82■□□□□ 0.6
USP11P51784 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
USP11P51784 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP11P51784 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP11P51784 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP11P51784 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.82■□□□□ 0.6
USP11P51784 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
USP11P51784 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.81■□□□□ 0.6
USP11P51784 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP11P51784 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.81■□□□□ 0.6
USP11P51784 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.81■□□□□ 0.6
USP11P51784 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms