Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC6A12P48065 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC6A12P48065 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC6A12P48065 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 AC079328.2-201ENST00000561241 3354 ntBASIC16.09■□□□□ 0.17
SLC6A12P48065 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SLC6A12P48065 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 PMS2P4-201ENST00000412466 1052 ntBASIC16.09■□□□□ 0.17
SLC6A12P48065 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC6A12P48065 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 POU5F1P6-201ENST00000466990 990 ntBASIC16.09■□□□□ 0.17
SLC6A12P48065 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC6A12P48065 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.09■□□□□ 0.17
SLC6A12P48065 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC6A12P48065 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 AC021097.1-201ENST00000607902 574 ntBASIC16.09■□□□□ 0.17
SLC6A12P48065 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SLC6A12P48065 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 AL391005.1-201ENST00000623953 2435 ntBASIC16.09■□□□□ 0.17
SLC6A12P48065 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SLC6A12P48065 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC6A12P48065 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC6A12P48065 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC6A12P48065 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.08■□□□□ 0.17
SLC6A12P48065 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.08■□□□□ 0.17
SLC6A12P48065 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SLC6A12P48065 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC6A12P48065 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC6A12P48065 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC6A12P48065 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC6A12P48065 KRT18P2-201ENST00000447938 1258 ntBASIC16.08■□□□□ 0.16
SLC6A12P48065 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC6A12P48065 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AC023141.13-201ENST00000604991 943 ntBASIC16.08■□□□□ 0.16
SLC6A12P48065 BX640515.1-201ENST00000617215 977 ntBASIC16.08■□□□□ 0.16
SLC6A12P48065 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.08■□□□□ 0.16
SLC6A12P48065 AC007064.4-201ENST00000637740 555 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms