Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 AC092171.3-201ENST00000610122 2651 ntBASIC16.88■□□□□ 0.29
HLA-DPA1P20036 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HLA-DPA1P20036 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 RHOQP3-201ENST00000437982 621 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AL513480.1-201ENST00000451731 511 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AC010507.1-201ENST00000633895 436 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 UBALD1-205ENST00000590891 2641 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 AL671710.1-201ENST00000610245 2349 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 ZNF259P1-201ENST00000407656 1365 ntBASIC16.87■□□□□ 0.29
HLA-DPA1P20036 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HLA-DPA1P20036 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 AL022342.1-201ENST00000400363 863 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 AL031432.2-201ENST00000566714 459 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 AL928711.1-201ENST00000570165 459 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 AC064836.3-201ENST00000607928 673 ntBASIC16.86■□□□□ 0.29
HLA-DPA1P20036 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HLA-DPA1P20036 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms