Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
NFKB1P19838 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17■□□□□ 0.31
NFKB1P19838 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 FDX1P1-201ENST00000449115 551 ntBASIC17■□□□□ 0.31
NFKB1P19838 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17■□□□□ 0.31
NFKB1P19838 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17■□□□□ 0.31
NFKB1P19838 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17■□□□□ 0.31
NFKB1P19838 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17■□□□□ 0.31
NFKB1P19838 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17■□□□□ 0.31
NFKB1P19838 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17■□□□□ 0.31
NFKB1P19838 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 TNRC18P3-201ENST00000441896 2691 ntBASIC17■□□□□ 0.31
NFKB1P19838 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NFKB1P19838 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NFKB1P19838 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NFKB1P19838 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NFKB1P19838 HCG4B-203ENST00000450128 991 ntBASIC16.99■□□□□ 0.31
NFKB1P19838 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.99■□□□□ 0.31
NFKB1P19838 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NFKB1P19838 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.99■□□□□ 0.31
NFKB1P19838 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NFKB1P19838 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NFKB1P19838 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NFKB1P19838 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NFKB1P19838 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
NFKB1P19838 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NFKB1P19838 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.98■□□□□ 0.31
NFKB1P19838 AC104109.2-201ENST00000602919 1418 ntBASIC16.98■□□□□ 0.31
NFKB1P19838 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NFKB1P19838 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.98■□□□□ 0.31
NFKB1P19838 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.98■□□□□ 0.31
NFKB1P19838 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.98■□□□□ 0.31
NFKB1P19838 AL513480.1-201ENST00000451731 511 ntBASIC16.98■□□□□ 0.31
NFKB1P19838 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.98■□□□□ 0.31
NFKB1P19838 MIR4515-201ENST00000584082 81 ntBASIC16.98■□□□□ 0.31
NFKB1P19838 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.98■□□□□ 0.31
NFKB1P19838 AC010507.1-201ENST00000633895 436 ntBASIC16.98■□□□□ 0.31
NFKB1P19838 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NFKB1P19838 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.98■□□□□ 0.31
NFKB1P19838 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 ME2P1-201ENST00000426028 1970 ntBASIC16.98■□□□□ 0.31
NFKB1P19838 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
NFKB1P19838 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NFKB1P19838 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NFKB1P19838 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms