Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.54■□□□□ 0.4
LMNAP02545 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LMNAP02545 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.53■□□□□ 0.4
LMNAP02545 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LMNAP02545 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.53■□□□□ 0.4
LMNAP02545 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LMNAP02545 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 MEIS3P1-201ENST00000495167 958 ntBASIC17.53■□□□□ 0.4
LMNAP02545 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.53■□□□□ 0.4
LMNAP02545 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.53■□□□□ 0.4
LMNAP02545 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.53■□□□□ 0.4
LMNAP02545 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 AC023141.13-201ENST00000604991 943 ntBASIC17.53■□□□□ 0.4
LMNAP02545 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.53■□□□□ 0.4
LMNAP02545 NCF1C-201ENST00000438382 1427 ntBASIC17.53■□□□□ 0.4
LMNAP02545 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LMNAP02545 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LMNAP02545 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LMNAP02545 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 PCDHA1-201ENST00000378133 2726 ntBASIC17.52■□□□□ 0.4
LMNAP02545 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LMNAP02545 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.52■□□□□ 0.4
LMNAP02545 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.52■□□□□ 0.4
LMNAP02545 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.52■□□□□ 0.4
LMNAP02545 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 AL020989.1-201ENST00000422979 469 ntBASIC17.52■□□□□ 0.4
LMNAP02545 AC055876.3-201ENST00000431496 288 ntBASIC17.52■□□□□ 0.4
LMNAP02545 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.52■□□□□ 0.4
LMNAP02545 AC122714.2-201ENST00000502787 707 ntBASIC17.52■□□□□ 0.4
LMNAP02545 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.52■□□□□ 0.4
LMNAP02545 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.52■□□□□ 0.4
LMNAP02545 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.52■□□□□ 0.4
LMNAP02545 AC138649.4-201ENST00000612222 287 ntBASIC17.52■□□□□ 0.4
LMNAP02545 AL358472.5-202ENST00000641448 1267 ntBASIC17.52■□□□□ 0.4
LMNAP02545 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LMNAP02545 CROCCP2-202ENST00000412962 2773 ntBASIC17.52■□□□□ 0.4
LMNAP02545 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMNAP02545 MYLKP1-201ENST00000509077 1580 ntBASIC17.52■□□□□ 0.39
LMNAP02545 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
LMNAP02545 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.52■□□□□ 0.39
LMNAP02545 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LMNAP02545 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LMNAP02545 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LMNAP02545 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
LMNAP02545 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.52■□□□□ 0.39
LMNAP02545 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LMNAP02545 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LMNAP02545 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
LMNAP02545 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LMNAP02545 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.51■□□□□ 0.39
LMNAP02545 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.51■□□□□ 0.39
LMNAP02545 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.51■□□□□ 0.39
LMNAP02545 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMNAP02545 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LMNAP02545 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms