Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.04□□□□□ -0.16
SIX6O95475 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.04□□□□□ -0.16
SIX6O95475 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
SIX6O95475 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.04□□□□□ -0.16
SIX6O95475 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.04□□□□□ -0.16
SIX6O95475 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.04□□□□□ -0.16
SIX6O95475 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 AC004263.2-201ENST00000617183 678 ntBASIC14.04□□□□□ -0.16
SIX6O95475 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.04□□□□□ -0.16
SIX6O95475 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.04□□□□□ -0.16
SIX6O95475 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SIX6O95475 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SIX6O95475 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 AC010460.3-201ENST00000511359 1579 ntBASIC14.04□□□□□ -0.16
SIX6O95475 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.04□□□□□ -0.16
SIX6O95475 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.04□□□□□ -0.16
SIX6O95475 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SIX6O95475 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.04□□□□□ -0.16
SIX6O95475 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 C8orf49-201ENST00000525043 1968 ntBASIC14.03□□□□□ -0.16
SIX6O95475 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 AC006449.6-201ENST00000612330 2296 ntBASIC14.03□□□□□ -0.16
SIX6O95475 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SIX6O95475 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.03□□□□□ -0.16
SIX6O95475 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 AC096633.1-201ENST00000422446 749 ntBASIC14.03□□□□□ -0.16
SIX6O95475 SLC25A1P2-201ENST00000430693 912 ntBASIC14.03□□□□□ -0.16
SIX6O95475 HLA-J-202ENST00000469281 1241 ntBASIC14.03□□□□□ -0.16
SIX6O95475 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SIX6O95475 AC024563.2-201ENST00000603282 481 ntBASIC14.03□□□□□ -0.16
SIX6O95475 AC019129.2-201ENST00000609837 1235 ntBASIC14.03□□□□□ -0.16
SIX6O95475 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
SIX6O95475 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.03□□□□□ -0.16
SIX6O95475 AC092865.7-201ENST00000641832 219 ntBASIC14.03□□□□□ -0.16
SIX6O95475 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.03□□□□□ -0.16
SIX6O95475 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
SIX6O95475 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SIX6O95475 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SIX6O95475 AP003680.1-201ENST00000598970 3660 ntBASIC14.02□□□□□ -0.16
SIX6O95475 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 CICP24-201ENST00000605464 2705 ntBASIC14.02□□□□□ -0.16
SIX6O95475 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SIX6O95475 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.02□□□□□ -0.16
SIX6O95475 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.02□□□□□ -0.16
SIX6O95475 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SIX6O95475 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SIX6O95475 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SIX6O95475 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms