Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 HMGA1P7-201ENST00000406908 502 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 AC015922.1-201ENST00000421102 1152 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 RBPMS2P1-201ENST00000437762 623 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 TERF1P3-201ENST00000505638 1227 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 IGHV3-62-201ENST00000520057 340 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 LINC01225-203ENST00000563550 1244 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 AL355312.1-201ENST00000407115 2176 ntBASIC16.59■□□□□ 0.25
PCDHGA12O60330 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGA12O60330 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGA12O60330 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
PCDHGA12O60330 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGA12O60330 AL118508.1-201ENST00000613502 2345 ntBASIC16.58■□□□□ 0.25
PCDHGA12O60330 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHGA12O60330 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 SPDYE7P-202ENST00000420373 878 ntBASIC16.58■□□□□ 0.24
PCDHGA12O60330 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 AC125807.1-201ENST00000483097 614 ntBASIC16.58■□□□□ 0.24
PCDHGA12O60330 AC109635.5-201ENST00000533593 962 ntBASIC16.58■□□□□ 0.24
PCDHGA12O60330 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 AL009183.1-201ENST00000603760 355 ntBASIC16.58■□□□□ 0.24
PCDHGA12O60330 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 AC063926.2-201ENST00000623766 1308 ntBASIC16.58■□□□□ 0.24
PCDHGA12O60330 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGA12O60330 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGA12O60330 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGA12O60330 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGA12O60330 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms