Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN1O15353 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
FOXN1O15353 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN1O15353 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN1O15353 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXN1O15353 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.9■□□□□ 0.78
FOXN1O15353 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN1O15353 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN1O15353 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.9■□□□□ 0.78
FOXN1O15353 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
FOXN1O15353 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.9■□□□□ 0.78
FOXN1O15353 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXN1O15353 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.89■□□□□ 0.78
FOXN1O15353 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
FOXN1O15353 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
FOXN1O15353 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXN1O15353 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
FOXN1O15353 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.89■□□□□ 0.77
FOXN1O15353 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
FOXN1O15353 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.89■□□□□ 0.77
FOXN1O15353 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXN1O15353 AP005482.1-201ENST00000563722 1273 ntBASIC19.89■□□□□ 0.77
FOXN1O15353 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
FOXN1O15353 LINC01451-201ENST00000623792 534 ntBASIC19.89■□□□□ 0.77
FOXN1O15353 AL109936.8-201ENST00000641772 604 ntBASIC19.89■□□□□ 0.77
FOXN1O15353 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
FOXN1O15353 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXN1O15353 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXN1O15353 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXN1O15353 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXN1O15353 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXN1O15353 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
FOXN1O15353 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXN1O15353 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.88■□□□□ 0.77
FOXN1O15353 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.88■□□□□ 0.77
FOXN1O15353 AC133552.6-201ENST00000613406 534 ntBASIC19.88■□□□□ 0.77
FOXN1O15353 SPDYE12P-201ENST00000618416 771 ntBASIC19.88■□□□□ 0.77
FOXN1O15353 MIR6869-201ENST00000619434 62 ntBASIC19.88■□□□□ 0.77
FOXN1O15353 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXN1O15353 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.88■□□□□ 0.77
FOXN1O15353 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN1O15353 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
FOXN1O15353 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.87■□□□□ 0.77
FOXN1O15353 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
FOXN1O15353 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXN1O15353 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
FOXN1O15353 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.87■□□□□ 0.77
FOXN1O15353 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms