Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.14■□□□□ 0.65
TMEM88BA6NKF7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AC016694.1-201ENST00000434179 700 ntBASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AL607033.1-201ENST00000623900 1599 ntBASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.13■□□□□ 0.65
TMEM88BA6NKF7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 ENPP7P5-201ENST00000541031 1031 ntBASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 RHOXF1P1-202ENST00000635473 501 ntBASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 AC128714.1-201ENST00000637035 887 ntBASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TMEM88BA6NKF7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 EIF4HP1-201ENST00000453115 687 ntBASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 AL139010.1-201ENST00000454878 894 ntBASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 RPS2P36-201ENST00000456516 831 ntBASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
TMEM88BA6NKF7 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms