Protein–RNA interactions for Protein: A0A087WVF3

TBC1D3D, TBC1 domain family member 3D, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3DA0A087WVF3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TBC1D3DA0A087WVF3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 AL023806.1-201ENST00000603994 1649 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 AL671710.1-201ENST00000610245 2349 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 TREML5P-201ENST00000421694 576 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 AC105233.2-201ENST00000523697 349 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 AF228730.5-201ENST00000530288 346 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 MIR4745-201ENST00000577608 62 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 FO538757.1-201ENST00000623083 1397 ntBASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TBC1D3DA0A087WVF3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TBC1D3DA0A087WVF3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TBC1D3DA0A087WVF3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TBC1D3DA0A087WVF3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 MIR4453-201ENST00000584019 89 ntBASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 AJ011932.1-201ENST00000621707 465 ntBASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TBC1D3DA0A087WVF3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TBC1D3DA0A087WVF3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms