Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
HLA-DRB4X5D2U9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 RNPS1P1-201ENST00000507437 918 ntBASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 AL021920.2-201ENST00000624828 1351 ntBASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
HLA-DRB4X5D2U9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 RPS2P28-201ENST00000314255 741 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 ELK2BP-201ENST00000415014 1224 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 RPS2P1-201ENST00000434010 821 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AC018712.1-201ENST00000455767 687 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AP002490.2-201ENST00000524791 560 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AL805961.1-202ENST00000641562 540 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AC092068.3-201ENST00000587894 2016 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 LINC00554-201ENST00000564841 3011 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 AC005052.1-201ENST00000625181 2492 ntBASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms