Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 TUBB8P12-201ENST00000308911 1335 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 TUBB7P-202ENST00000428444 1305 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 AC093004.1-201ENST00000508850 424 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 DOC2GP-202ENST00000514950 1163 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 TUBB8P7-204ENST00000567960 1332 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 CHCHD2P3-201ENST00000603038 451 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 AC008494.3-201ENST00000606615 944 ntBASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.34■□□□□ 0.37
HCFC2Q9Y5Z7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HCFC2Q9Y5Z7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AC013467.2-201ENST00000605472 835 ntBASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AC017083.2-201ENST00000608069 979 ntBASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AL162274.1-201ENST00000617191 1098 ntBASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 AC067852.2-201ENST00000590513 2313 ntBASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 LINC02012-201ENST00000608206 1725 ntBASIC17.33■□□□□ 0.36
HCFC2Q9Y5Z7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 CROCCP2-202ENST00000412962 2773 ntBASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AC092053.1-201ENST00000605787 1936 ntBASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AC011495.1-201ENST00000498085 584 ntBASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 SPDYE18-201ENST00000510091 1050 ntBASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AC124947.2-201ENST00000547118 1133 ntBASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 AC044860.1-202ENST00000559481 777 ntBASIC17.32■□□□□ 0.36
HCFC2Q9Y5Z7 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms