Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 RNA5SP421-201ENST00000516864 134 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 SLC25A39P2-201ENST00000537614 270 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AL512356.2-201ENST00000546955 174 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AC124947.2-201ENST00000547118 1133 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 DUX4L27-201ENST00000554796 1261 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 LINC01225-203ENST00000563550 1244 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AC015911.4-201ENST00000588022 1070 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 LINC00896-202ENST00000609602 2128 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 KLF2P3-201ENST00000451977 1087 ntBASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 AC026150.2-201ENST00000564693 1156 ntBASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 MIR6080-201ENST00000617359 66 ntBASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTDP1Q9Y5B0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 MIR943-201ENST00000401286 94 ntBASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 IGHV3-42-201ENST00000520410 361 ntBASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 MIR4492-201ENST00000581627 80 ntBASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 AC005498.2-205ENST00000593218 784 ntBASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 AL096865.1-201ENST00000606796 927 ntBASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTDP1Q9Y5B0 AC108860.2-201ENST00000562760 2183 ntBASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CTDP1Q9Y5B0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms