Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 NUS1P1-201ENST00000446295 882 ntBASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 AL353801.3-201ENST00000609898 542 ntBASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 AL121772.3-201ENST00000610840 674 ntBASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 POM121L3P-201ENST00000419331 1163 ntBASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 CLEC4GP1-201ENST00000596555 870 ntBASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 AC138894.3-201ENST00000603787 634 ntBASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 FLJ16779-201ENST00000612722 7638 ntBASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 TCAF2P1-201ENST00000291129 2421 ntBASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HCC1Q9Y3T6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 AC096582.2-201ENST00000510860 516 ntBASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
R3HCC1Q9Y3T6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HCC1Q9Y3T6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HCC1Q9Y3T6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
R3HCC1Q9Y3T6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms