Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 AC122714.2-201ENST00000502787 707 ntBASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 STK19B-204ENST00000512515 211 ntBASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 DUX4L17-201ENST00000557360 1267 ntBASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 AC009336.1-201ENST00000608941 1553 ntBASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AL355075.4-201ENST00000554988 638 ntBASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ZNF444P1-201ENST00000559497 298 ntBASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 NAPSB-206ENST00000562112 1266 ntBASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC141257.4-201ENST00000634557 245 ntBASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC136944.6-201ENST00000634818 245 ntBASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 AC073347.1-201ENST00000421633 2643 ntBASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
RCL1Q9Y2P8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms