Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.83■□□□□ 0.44
SIX4Q9UIU6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SIX4Q9UIU6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SIX4Q9UIU6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 KRT18P34-201ENST00000488218 1270 ntBASIC17.82■□□□□ 0.44
SIX4Q9UIU6 AC069335.1-201ENST00000489972 472 ntBASIC17.82■□□□□ 0.44
SIX4Q9UIU6 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SIX4Q9UIU6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.81■□□□□ 0.44
SIX4Q9UIU6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SIX4Q9UIU6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AL592309.1-201ENST00000443127 649 ntBASIC17.8■□□□□ 0.44
SIX4Q9UIU6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.8■□□□□ 0.44
SIX4Q9UIU6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms