Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AC137549.1-201ENST00000514243 533 ntBASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
FOXD4L1Q9NU39 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AL391256.1-201ENST00000443260 1855 ntBASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 RNF152P1-201ENST00000397754 604 ntBASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AP001020.1-201ENST00000579595 464 ntTSL 3 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 AC083849.1-201ENST00000615227 514 ntBASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FOXD4L1Q9NU39 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 AK4P3-201ENST00000418260 669 ntBASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 AC009245.1-201ENST00000456481 862 ntBASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 IL12A-AS1-201ENST00000462431 988 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 STK25P1-201ENST00000585406 838 ntBASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 AC092964.1-201ENST00000623304 1399 ntBASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
FOXD4L1Q9NU39 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms