Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 AC105020.1-201ENST00000435356 2205 ntBASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AL671710.1-201ENST00000610245 2349 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC009477.1-201ENST00000452936 217 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AL138918.1-201ENST00000568306 659 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC138969.3-201ENST00000546612 1459 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC138932.2-201ENST00000548268 1459 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC126755.4-201ENST00000549796 1459 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC026471.1-201ENST00000564629 3026 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 AC016027.1-202ENST00000607927 1699 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.56■□□□□ 0.56
PDLIM7Q9NR12 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 AL391256.1-201ENST00000443260 1855 ntBASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 RARRES2P9-201ENST00000565168 469 ntBASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 AL132655.2-201ENST00000596276 594 ntBASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 AC007967.4-201ENST00000614700 386 ntBASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 AL139011.1-202ENST00000642063 584 ntBASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PDLIM7Q9NR12 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 AC142381.1-201ENST00000426099 345 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 HLA-V-204ENST00000476601 1289 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 GIMAP3P-201ENST00000495150 836 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 API5-211ENST00000534695 560 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 AC140912.1-201ENST00000577171 1054 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms