Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 AL513190.1-201ENST00000621254 727 ntBASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 AC092171.3-201ENST00000610122 2651 ntBASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 AL512652.2-201ENST00000625156 1716 ntBASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR1EQ9GZS1 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 PMS2P4-201ENST00000412466 1052 ntBASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 AC074386.1-202ENST00000463561 864 ntBASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 AL671883.3-201ENST00000603274 991 ntBASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR1EQ9GZS1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 AC140658.5-201ENST00000438532 169 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 PGAM5P1-201ENST00000518923 814 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 AC068137.2-201ENST00000605408 478 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 AC021097.1-201ENST00000607902 574 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 AC092865.6-201ENST00000642101 219 ntBASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
POLR1EQ9GZS1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms