Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 MTHFR-217ENST00000641820 1569 ntBASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.72□□□□□ -0.37
SSBP4Q9BWG4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TNRC18P2-201ENST00000417666 2714 ntBASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AC068472.1-201ENST00000474589 881 ntBASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AL355075.4-201ENST00000554988 638 ntBASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 GCSHP2-201ENST00000560971 527 ntBASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 NAPSB-206ENST00000562112 1266 ntBASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 AC079602.3-201ENST00000623931 403 ntBASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
SSBP4Q9BWG4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.71□□□□□ -0.38
SSBP4Q9BWG4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 AC010491.1-201ENST00000563101 2797 ntBASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 AL122018.1-201ENST00000446607 2310 ntBASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 HLA-F-220ENST00000434407 884 ntBASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 RASA4DP-201ENST00000460726 1199 ntBASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 ECEL1P2-202ENST00000465689 757 ntBASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SSBP4Q9BWG4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms