Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PKP4Q99569 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PKP4Q99569 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PKP4Q99569 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
PKP4Q99569 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.29■□□□□ 0.2
PKP4Q99569 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.29■□□□□ 0.2
PKP4Q99569 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PKP4Q99569 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.29■□□□□ 0.2
PKP4Q99569 HMGA1P7-201ENST00000406908 502 ntBASIC16.29■□□□□ 0.2
PKP4Q99569 MED15P5-201ENST00000423150 992 ntBASIC16.29■□□□□ 0.2
PKP4Q99569 KRT18P3-201ENST00000451602 1288 ntBASIC16.29■□□□□ 0.2
PKP4Q99569 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.29■□□□□ 0.2
PKP4Q99569 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.29■□□□□ 0.2
PKP4Q99569 AC023141.13-201ENST00000604991 943 ntBASIC16.29■□□□□ 0.2
PKP4Q99569 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.29■□□□□ 0.2
PKP4Q99569 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.29■□□□□ 0.2
PKP4Q99569 AC004877.2-201ENST00000623941 599 ntBASIC16.29■□□□□ 0.2
PKP4Q99569 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 AL645728.2-201ENST00000641974 660 ntBASIC16.29■□□□□ 0.2
PKP4Q99569 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PKP4Q99569 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PKP4Q99569 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PKP4Q99569 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 AL512652.2-201ENST00000625156 1716 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 TNRC18P3-201ENST00000441896 2691 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 BCAR1-209ENST00000546196 1340 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PKP4Q99569 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.28■□□□□ 0.2
PKP4Q99569 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.28■□□□□ 0.2
PKP4Q99569 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.28■□□□□ 0.2
PKP4Q99569 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 AL031432.2-201ENST00000566714 459 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 AL928711.1-201ENST00000570165 459 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.28■□□□□ 0.2
PKP4Q99569 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PKP4Q99569 AC007064.4-201ENST00000637740 555 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PKP4Q99569 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PKP4Q99569 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PKP4Q99569 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PKP4Q99569 AC025580.3-201ENST00000617932 1424 ntBASIC16.28■□□□□ 0.2
PKP4Q99569 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PKP4Q99569 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PKP4Q99569 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PKP4Q99569 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PKP4Q99569 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PKP4Q99569 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PKP4Q99569 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PKP4Q99569 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PKP4Q99569 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms