Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.69■□□□□ 0.42
CASD1Q96PB1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASD1Q96PB1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.68■□□□□ 0.42
CASD1Q96PB1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.68■□□□□ 0.42
CASD1Q96PB1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASD1Q96PB1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASD1Q96PB1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 ZNF890P-202ENST00000530367 1156 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 API5-211ENST00000534695 560 ntTSL 5 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 TP53TG3HP-202ENST00000569755 579 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AL132655.2-201ENST00000596276 594 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AC007541.1-201ENST00000570282 1469 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASD1Q96PB1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASD1Q96PB1 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AL589702.1-201ENST00000641229 1509 ntBASIC17.67■□□□□ 0.42
CASD1Q96PB1 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CASD1Q96PB1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASD1Q96PB1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms