Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 MIR658-201ENST00000385210 100 ntBASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 MEP1AP4-201ENST00000423244 1087 ntBASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 AC055876.2-201ENST00000531834 546 ntBASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 AC104581.1-202ENST00000635932 2618 ntBASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NECTIN4Q96NY8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.21■□□□□ 0.34
NECTIN4Q96NY8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 SLC7A15P-201ENST00000424028 1363 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 AC112492.5-201ENST00000421897 457 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 CHCHD2P3-201ENST00000603038 451 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 AC007431.3-201ENST00000623221 587 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 AL355312.1-201ENST00000407115 2176 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 NOC2LP1-202ENST00000452600 2235 ntBASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NECTIN4Q96NY8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 FRMD8P1-201ENST00000440433 1524 ntBASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NECTIN4Q96NY8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms