Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 GUSBP12-201ENST00000513727 720 ntBASIC14.44□□□□□ -0.1
CMTM3Q96MX0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 DBET-201ENST00000630918 3363 ntBASIC14.44□□□□□ -0.1
CMTM3Q96MX0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CMTM3Q96MX0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 KRT17P2-201ENST00000300992 1314 ntBASIC14.43□□□□□ -0.1
CMTM3Q96MX0 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 AC016027.1-202ENST00000607927 1699 ntBASIC14.43□□□□□ -0.1
CMTM3Q96MX0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 FLJ16779-201ENST00000612722 7638 ntBASIC14.43□□□□□ -0.1
CMTM3Q96MX0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 MIR648-201ENST00000385046 94 ntBASIC14.43□□□□□ -0.1
CMTM3Q96MX0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.43□□□□□ -0.1
CMTM3Q96MX0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 AC069224.1-201ENST00000566372 1715 ntBASIC14.43□□□□□ -0.1
CMTM3Q96MX0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CMTM3Q96MX0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 TNRC18P2-201ENST00000417666 2714 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 SPDYE15P-201ENST00000424157 909 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 TSPY7P-201ENST00000431358 1114 ntBASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.42□□□□□ -0.1
CMTM3Q96MX0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms