Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 DNAJB3-202ENST00000449667 1266 ntBASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AP001160.2-201ENST00000596071 487 ntBASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AC026120.1-201ENST00000611536 926 ntBASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 PKD1P5-201ENST00000532415 10291 ntBASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.96□□□□□ -0.34
UBE2E2Q96LR5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 AC060834.1-201ENST00000443027 2032 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 SPDYE11-202ENST00000450699 704 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 SPDYE9P-201ENST00000570642 692 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 AC099522.2-201ENST00000607001 744 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 SPDYE10P-202ENST00000612005 668 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 SPDYE8P-202ENST00000612377 668 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 AL391256.1-201ENST00000443260 1855 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 WASH6P-202ENST00000359512 1437 ntBASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.95□□□□□ -0.34
UBE2E2Q96LR5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.94□□□□□ -0.34
UBE2E2Q96LR5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms