Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CHMP6Q96FZ7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 KRT18P57-201ENST00000443599 1254 ntBASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHMP6Q96FZ7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 MTCL1P1-201ENST00000446207 792 ntBASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 AC139887.4-201ENST00000607877 719 ntBASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 NORAD-201ENST00000565493 5339 ntBASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHMP6Q96FZ7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP6Q96FZ7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP6Q96FZ7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.3
CHMP6Q96FZ7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.89■□□□□ 0.3
CHMP6Q96FZ7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHMP6Q96FZ7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP6Q96FZ7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms