Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 AP002414.3-201ENST00000589352 1468 ntBASIC17.05■□□□□ 0.32
RTP4Q96DX8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RTP4Q96DX8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RTP4Q96DX8 AL365203.3-201ENST00000609742 2057 ntBASIC17.05■□□□□ 0.32
RTP4Q96DX8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 KRT18P58-201ENST00000527480 1120 ntBASIC17.04■□□□□ 0.32
RTP4Q96DX8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.04■□□□□ 0.32
RTP4Q96DX8 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.04■□□□□ 0.32
RTP4Q96DX8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RTP4Q96DX8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
RTP4Q96DX8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 RPS2P28-201ENST00000314255 741 ntBASIC17.03■□□□□ 0.32
RTP4Q96DX8 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.03■□□□□ 0.32
RTP4Q96DX8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 ACTL9-202ENST00000612068 1252 ntBASIC17.03■□□□□ 0.32
RTP4Q96DX8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 AC006449.6-201ENST00000612330 2296 ntBASIC17.03■□□□□ 0.32
RTP4Q96DX8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
RTP4Q96DX8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTP4Q96DX8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 LINC02199-201ENST00000506655 2702 ntBASIC17.02■□□□□ 0.32
RTP4Q96DX8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTP4Q96DX8 MRPL20P1-201ENST00000400819 433 ntBASIC17.02■□□□□ 0.32
RTP4Q96DX8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 FAM185BP-201ENST00000443595 716 ntBASIC17.02■□□□□ 0.32
RTP4Q96DX8 AC108073.2-201ENST00000464002 357 ntBASIC17.02■□□□□ 0.32
RTP4Q96DX8 RPL13AP23-201ENST00000480739 586 ntBASIC17.02■□□□□ 0.32
RTP4Q96DX8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.02■□□□□ 0.32
RTP4Q96DX8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms