Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 PAWRP1-201ENST00000451083 565 ntBASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 AC087163.2-201ENST00000457299 853 ntBASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00346Q8IVM7 AC006538.1-201ENST00000567905 1585 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 AC008894.3-201ENST00000624324 3103 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 LINC02199-201ENST00000506655 2702 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 RPS2P1-201ENST00000434010 821 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 UNC93B7-201ENST00000509439 705 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 TOP3BP1-201ENST00000420768 1380 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 AC002310.6-201ENST00000624451 1377 ntBASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00346Q8IVM7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 LAGE3P1-201ENST00000425356 484 ntBASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 AC006557.2-201ENST00000592985 1240 ntBASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00346Q8IVM7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms