Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 HLA-J-202ENST00000469281 1241 ntBASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 AL136038.3-201ENST00000561909 1096 ntBASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LCN1P1Q5VSP4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CHCHD2P8-201ENST00000429873 447 ntBASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 BX276092.5-203ENST00000456199 560 ntBASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 AL121672.3-201ENST00000608644 468 ntBASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
LCN1P1Q5VSP4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 AC067930.6-201ENST00000623257 4947 ntBASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LCN1P1Q5VSP4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.2■□□□□ 0.02
LCN1P1Q5VSP4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms