Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 NEFHP1-201ENST00000412845 2629 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 RNA5SP410-201ENST00000516285 106 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 ZNF890P-202ENST00000530367 1156 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 AL132655.2-201ENST00000596276 594 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 AC004790.1-201ENST00000612686 536 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRIM71Q2Q1W2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRIM71Q2Q1W2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 CU639417.3-201ENST00000624240 1404 ntBASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRIM71Q2Q1W2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM71Q2Q1W2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM71Q2Q1W2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM71Q2Q1W2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
TRIM71Q2Q1W2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRIM71Q2Q1W2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms