Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.2□□□□□ -0.14
SSBP1Q04837 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 PRORSD1P-201ENST00000295112 541 ntBASIC14.2□□□□□ -0.14
SSBP1Q04837 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 MIR648-201ENST00000385046 94 ntBASIC14.2□□□□□ -0.14
SSBP1Q04837 SPDYE15P-201ENST00000424157 909 ntBASIC14.2□□□□□ -0.14
SSBP1Q04837 AL158047.1-201ENST00000445918 881 ntBASIC14.2□□□□□ -0.14
SSBP1Q04837 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.2□□□□□ -0.14
SSBP1Q04837 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
SSBP1Q04837 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.2□□□□□ -0.14
SSBP1Q04837 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.2□□□□□ -0.14
SSBP1Q04837 AL355075.4-201ENST00000554988 638 ntBASIC14.2□□□□□ -0.14
SSBP1Q04837 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC14.2□□□□□ -0.14
SSBP1Q04837 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SSBP1Q04837 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 LINC01144-201ENST00000626198 1710 ntBASIC14.2□□□□□ -0.14
SSBP1Q04837 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.2□□□□□ -0.14
SSBP1Q04837 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.2□□□□□ -0.14
SSBP1Q04837 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SSBP1Q04837 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP1Q04837 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP1Q04837 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP1Q04837 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.19□□□□□ -0.14
SSBP1Q04837 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSBP1Q04837 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.19□□□□□ -0.14
SSBP1Q04837 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SSBP1Q04837 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 AL359075.1-203ENST00000462729 1002 ntBASIC14.19□□□□□ -0.14
SSBP1Q04837 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.19□□□□□ -0.14
SSBP1Q04837 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP1Q04837 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.19□□□□□ -0.14
SSBP1Q04837 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SSBP1Q04837 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SSBP1Q04837 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.19□□□□□ -0.14
SSBP1Q04837 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.18□□□□□ -0.14
SSBP1Q04837 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.18□□□□□ -0.14
SSBP1Q04837 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
SSBP1Q04837 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
SSBP1Q04837 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
SSBP1Q04837 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms