Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.82■□□□□ 0.28
AP1S1P61966 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
AP1S1P61966 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.82■□□□□ 0.28
AP1S1P61966 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S1P61966 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S1P61966 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.82■□□□□ 0.28
AP1S1P61966 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
AP1S1P61966 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.81■□□□□ 0.28
AP1S1P61966 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
AP1S1P61966 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 AKAP8P1-201ENST00000434743 1349 ntBASIC16.81■□□□□ 0.28
AP1S1P61966 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
AP1S1P61966 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 MIR1233-2-201ENST00000408138 82 ntBASIC16.81■□□□□ 0.28
AP1S1P61966 MIR1233-1-201ENST00000408722 82 ntBASIC16.81■□□□□ 0.28
AP1S1P61966 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 ADH5P3-201ENST00000433842 1137 ntBASIC16.81■□□□□ 0.28
AP1S1P61966 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.81■□□□□ 0.28
AP1S1P61966 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.81■□□□□ 0.28
AP1S1P61966 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
AP1S1P61966 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.81■□□□□ 0.28
AP1S1P61966 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.81■□□□□ 0.28
AP1S1P61966 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
AP1S1P61966 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S1P61966 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
AP1S1P61966 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
AP1S1P61966 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.81■□□□□ 0.28
AP1S1P61966 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S1P61966 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP1S1P61966 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.8■□□□□ 0.28
AP1S1P61966 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP1S1P61966 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.8■□□□□ 0.28
AP1S1P61966 AL671277.1-201ENST00000429656 993 ntBASIC16.8■□□□□ 0.28
AP1S1P61966 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.8■□□□□ 0.28
AP1S1P61966 CEND1P1-201ENST00000451006 455 ntBASIC16.8■□□□□ 0.28
AP1S1P61966 RN7SL589P-201ENST00000481268 310 ntBASIC16.8■□□□□ 0.28
AP1S1P61966 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.8■□□□□ 0.28
AP1S1P61966 MIR4469-201ENST00000583919 79 ntBASIC16.8■□□□□ 0.28
AP1S1P61966 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S1P61966 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S1P61966 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
AP1S1P61966 AC020765.3-201ENST00000613051 740 ntBASIC16.8■□□□□ 0.28
AP1S1P61966 AL031731.1-201ENST00000642131 2094 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms