Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.26□□□□□ -0.45
APOC4P55056 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
APOC4P55056 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
APOC4P55056 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.26□□□□□ -0.45
APOC4P55056 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOC4P55056 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 AL133373.2-201ENST00000623187 2828 ntBASIC12.25□□□□□ -0.45
APOC4P55056 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
APOC4P55056 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 KRT18P32-201ENST00000424695 1287 ntBASIC12.25□□□□□ -0.45
APOC4P55056 ADH5P3-201ENST00000433842 1137 ntBASIC12.25□□□□□ -0.45
APOC4P55056 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 KRT18P34-201ENST00000488218 1270 ntBASIC12.25□□□□□ -0.45
APOC4P55056 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 KRT8P23-201ENST00000560090 1207 ntBASIC12.25□□□□□ -0.45
APOC4P55056 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.25□□□□□ -0.45
APOC4P55056 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
APOC4P55056 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.25□□□□□ -0.45
APOC4P55056 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
APOC4P55056 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
APOC4P55056 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
APOC4P55056 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
APOC4P55056 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
APOC4P55056 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
APOC4P55056 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.24□□□□□ -0.45
APOC4P55056 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.24□□□□□ -0.45
APOC4P55056 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 AC079140.1-201ENST00000508039 487 ntBASIC12.24□□□□□ -0.45
APOC4P55056 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
APOC4P55056 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.24□□□□□ -0.45
APOC4P55056 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC12.24□□□□□ -0.45
APOC4P55056 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
APOC4P55056 AC013467.2-201ENST00000605472 835 ntBASIC12.24□□□□□ -0.45
APOC4P55056 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.24□□□□□ -0.45
APOC4P55056 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
APOC4P55056 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.24□□□□□ -0.45
APOC4P55056 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
APOC4P55056 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
APOC4P55056 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
APOC4P55056 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
APOC4P55056 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC4P55056 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
APOC4P55056 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC4P55056 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
APOC4P55056 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC4P55056 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC4P55056 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.23□□□□□ -0.45
APOC4P55056 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
APOC4P55056 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms